Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015787769.1_cds_XP_016512584.1_244
CDS Infomation

[gene=LOC107829614] [db_xref=GeneID:107829614] [protein=probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic] [protein_id=XP_016512584.1] [location=join(1403..1609,2213..2413,2496..2789,2890..3159,3303..3392,3476..3607,7127..7300,7791..7912,13899..14100,14658..14786,23788..23970,26174..26293,31181..31366,31463..31537,32015..32074,37457..37564,38862..38939,41792..41863)] [gbkey=CDS]
Sequence

ATGATTAGACCGACTATGTTGTATGGTGTAGAGTATTGGCGTGTAAAGGAATTCCACGTC
CAGAAGATGAAAGTGGTGGAAATGAGAATGGTGAGATGGATGTGTCATACCGGGAGAGAT
AAGATTAGAGGAAAGAACATATTGGGGACAAATGGGAGTGGTCTTCGTGGAGGACAAGAT
GCGGGAAGTGAGGTTGAGATAGTTCGGGAAAGGATCCTCCTGGATCGGGATAGAGTGGTG
GCAAAATCATGGTACAATGAAGAAAGAAATAGGTGGGAGATGGATCCTGTGGCTGTTCCC
TATGCTGTGTCCAAGAAGCTTCTTGAGAGTGCTAGAATCAGACATGACTGGGCTGCCATG
TATGTTATGTTGAAGGGAGATGACAAAGAGTATAATGTTGATATCAAGGAATATGATATG
ATTTATGAAGATTTGGGAGGTTTTGATGCCTTGTACCTGAGAATGCTTGCTTCAGGTATT
CCAACTGTGGTTCAGCTGATGTGGATTCCTTTCTCAGAACTGGACTTCCGCCAACAATTT
CTCTTGGTCACAAGACTCTGTCTTCAATGTCTAAATGGATTGTGGACTCTGAGAATTGTT
TCATGCGGGAGAGACTGGATTGTGGAGAAAGTTAGAAACATAAATGATGACATCATGATG
ATGATTGTTTTCCCTACCGTGGAATTTGTCATCCCTTATCGGGTGAGGATGCGGCTGGGT
ATGGCTTGGCCAGAGTATGTCGATCAATCTGTTGCCTCAACTTGGTACTTGAAATGGCAA
TCTGAGGCTGAAATGAGTTTCAGATCAAGAAAAACAGATGAATTGCAGTGGTATCTCTGG
TTCTTGATTAGAACTGCAATATATGGCTATGTATTGTATTATGTGATACGCTTTATGAAG
AGGAAAATTCCACGGCTTCTTGGTTATGGACCTTTAAGGAGAAACCCCAACTTACGGAAG
CTGCGGAGAGTGAAAGCATATTTTAGATTTAGGACGAGGAGAATAAAGCGAAAAAAGAAG
GCAGGTGTTGATCCAATCAGTACTGCTTTTGATCAGATGAAGAGGGTGAAGAATCCCCCT
ATACGTTTGAATGACTTTGCAAGCATTGATTCTATGAGAGAAGAAATTAATGAAGTCGTA
GCATTTTTGCAAAATCCTCGCGCTTTTCAAGAAATGGGAGCTCGCGCCCCTCGGGGAGTT
CTTATTGTAGGGGAGAGAGGAACTGGAAAGACATCCCTAGCACTAGCAATTGCAGCAGAA
GCTAAGGTGCCTCTTGTTGAAGTTAAAGCCCAACAGTTAGAGGCTGGTTTATGGGTTGGC
CAAAGTGCATCAAATGTTAGAGAGCTGTTTCAAACAGCACGTGATCTGGCCCCTGTAATC
ATATTTGTGGAGGATTTTGACCTCTTTGCTGGAGTCAGAGGGAAGTTTATCCACACTAAA
AAGCAGGACCATGAAGCCTTCATCAATCAACTCTTGGTGGAACTTGATGGGTTTGAAAAA
CAGGATGGTGTGGTCTTGATGGCTACTACAAGAAATCTCAAGCAAATCGATGAGGCCTTG
CAACGTCCTGGTCGGATGGATAGGATATTCCGTCTTCAGCGGCCTACTCAAGCAGAAAGA
GAAAAGATACTTACGATAGCTGCAAAAGGAACTATGGATGAAGAACTTATAGATTTTGTA
GATTGGAGAAAGGTCGCAGAGAAAACAGCTCTTTTGCGTCCAAGTGAACTAAAACTTGTT
CCCGTGGCCTTGGAAGGTAGTGCCTTTCGAAGCAAATTCCTGGACATAGATGAGCTTATG
ACCCACTGCAGCTGGTTTGCGACCTTCAGCAGCCTTGTCCCGAAATGGTTAAGGAAGACC
AAAGCTGTAAAGCAATTAAGCAGAATGCTGGTGAATCATCTTGGATTGACATTAACGAAA
GAGGATCTAGAAAGTGTTGTTGATCTAATGGAGCCTTATGGTCAAATAAGCAACGGAATC
GAATTGCTAAATCCTCCTCTTGATTGGACAATGGAAACAAAGTTTCCGCATGCTGTTTGG
GCTGCCGGTCGGAGTTTAATTGCTCTTCTTCTACCAAACTTCGATATTGTGGATAATCTG
TGGCTTGAGCCTTTCTCGTGGGAGGGAATTGGGTGTACTAAGATCACCAAAGCTAAAAAT
GAAGGTTCTATCAGTGGGAATGTTGAATCAAGATCATATCTTGAAAAAAGACTAGTTTTT
TGCTTTGGTTCTTATGTTGCGGCGCAGCTATTGCTTCCATTTGGGGAAGAAAACATTCTT
TCTTCATCAGAGCTGAAGCAGGCACAAGAGATAGCTACAAGGATGGTGATTCAATATGGC
TGGGGCCCCGATGATAGTCCTACGATTTACCATCATGGCAATTCGGTGACAGCTTTGAGT
ATGGGAAACCATTTTGAATATGAGATGGCTACAAAAGTGGAAAAGATGTACTATATGGCT
TATGATAAAGCAAAACAAATGCTACAGAGAAATCGACAAGTGCTAGAGAAGATTGTAGAG
GACCTGCTCAAGTATGAAATTTTGACAAGAAAGGATCTGGAGAGAATTCTTGCTGACAAT
GATGGGCTGCGTGAAAAAGAACCATTCTTCCTTTCGAAAGCAAATAATGAGCCTGTGCTA
GATAGTTTCCTCGATGGAAACGGGAGAGCTTCTTCAATGGCATTTCTAACAGCTGCAAAT
TAA

Peptide Sequence

PEP ID

XP_016512584.1
PEP Infomation

PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic [Nicotiana tabacum]
Sequence

MIRPTMLYGVEYWRVKEFHVQKMKVVEMRMVRWMCHTGRDKIRGKNILGTNGSGLRGGQD
AGSEVEIVRERILLDRDRVVAKSWYNEERNRWEMDPVAVPYAVSKKLLESARIRHDWAAM
YVMLKGDDKEYNVDIKEYDMIYEDLGGFDALYLRMLASGIPTVVQLMWIPFSELDFRQQF
LLVTRLCLQCLNGLWTLRIVSCGRDWIVEKVRNINDDIMMMIVFPTVEFVIPYRVRMRLG
MAWPEYVDQSVASTWYLKWQSEAEMSFRSRKTDELQWYLWFLIRTAIYGYVLYYVIRFMK
RKIPRLLGYGPLRRNPNLRKLRRVKAYFRFRTRRIKRKKKAGVDPISTAFDQMKRVKNPP
IRLNDFASIDSMREEINEVVAFLQNPRAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE
AKVPLVEVKAQQLEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTK
KQDHEAFINQLLVELDGFEKQDGVVLMATTRNLKQIDEALQRPGRMDRIFRLQRPTQAER
EKILTIAAKGTMDEELIDFVDWRKVAEKTALLRPSELKLVPVALEGSAFRSKFLDIDELM
THCSWFATFSSLVPKWLRKTKAVKQLSRMLVNHLGLTLTKEDLESVVDLMEPYGQISNGI
ELLNPPLDWTMETKFPHAVWAAGRSLIALLLPNFDIVDNLWLEPFSWEGIGCTKITKAKN
EGSISGNVESRSYLEKRLVFCFGSYVAAQLLLPFGEENILSSSELKQAQEIATRMVIQYG
WGPDDSPTIYHHGNSVTALSMGNHFEYEMATKVEKMYYMAYDKAKQMLQRNRQVLEKIVE
DLLKYEILTRKDLERILADNDGLREKEPFFLSKANNEPVLDSFLDGNGRASSMAFLTAAN

Transcript Sequence

Gene sequence data has not been registered.